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Center for Population Biology (CPB)

Pop Bio Cohort Olympics: 2007 - 2010. (S. Macey)

 

2010 - 2011 Workshops (Updated 01/13/11)

  • Bodega Phylogenetic Workshop (March 2011)
  • Hierarchical Modeling in Ecology: a practical introduction to understanding and using hierarchical models.  Through two lectures and three hands-on computer labs with ecological data, this workshop will introduce participants to hierarchical models.These models, also known as multilevel or mixed models, allow us to consider more than one level of variability. Multiple levels of variation are nearly always present in ecological studies. Familiar examples include nested study designs or population time series. Traditional statistics can force us to make assumptions about the distribution of variation in our studies. Hierarchical modeling allows ecologists to use scientific expertise to build custom models with the stochasticity that best represents their study systems.

Please note, lab sessions require registration and are currently at capacity.

Lectures and seminar are open to all.

Monday 24 Jan (3:10 – 4:00 PM, LSA 1022)
Lecture: Hierarchical models: what and why?
Richard McElreath, Associate Professor, Dept. of Anthropology, UC Davis

Tuesday 25 Jan (2:10 – 3:30 PM, LSA 1022)
Lab: A maximum-likelihood approach to hierarchical modeling using R
Parry Clarke, post-doctoral scholar, Dept. of Anthropology, UC Davis

Tuesday 25 Jan (4:10 – 5:00 PM, LSA 1022)
Seminar: "Learning in a noisy environment: Adaptive management for inconvenient models"
Michael Springborn, Assistant Professor, Dept. of Environmental Science & Policy, UC Davis

Wednesday 26 Jan (3:10 – 4:00 PM, LSA 1022)
Lab: A Bayesian approach to hierarchical modeling, using R to build
our own estimator from scratch
Richard McElreath, Associate Professor, Dept. of Anthropology, UC Davis.

Thursday 27 Jan (3:10 – 4:00 PM, PES 3001)
Lecture: Bayesian hierarchical models for multilevel data and simple process models.
Andrew Latimer, Assistant Professor, Dept. of Plant Sciences, UC Davis.

Friday 28 Jan (3:10 – 5:30 PM, Asmundson 242)
Lab: Implementing Bayesian hierarchical models using OpenBUGS — examples include a hierarchical model and a simple growth model.
Andrew Latimer, Assistant Professor, Dept. of Plant Sciences, UC Davis.

Please email any questions to jashander@ucdavis.edu
This workshop is sponsored by the UC Davis Center for Population Biology



 

Workshop Archive

  • Bay Area Biosystematists: Discussion of species delimitation methods. UC Davis guest speakers: Drs. Bruce Rannala, H. Bradley Shaffer, and Phil Ward (October 2010)
  • Data Procurement and Assembly through Tree Building (Linux from the ground up) (February 2010)
  • Using Phylogenies in Ecological and Evolutionary Research. Presented by Drs. Samantha Price and Roi Holzman, UC Davis (May 2010)
  • Genomics and Genetics in Non-Model Organisms. Guest speakers: Katie Peichel, Fred Hutchinson Cancer Research Center; and John Willis, Duke University (April 2010)
  • Coevolution Workshop. Guest speakers: Joel Sachs, UC Riverside; Scott Nuismer, University of Idaho; Mark Rausher, Duke University; and Monica Medina, UC Merced (April 2008)
  • Metabolic Theory of Ecology. Guest speakers: James H. Borwn, University of New Mexico; and Susan Harrison, UC Davis (May 2008)
  • Paleontology and Its Relevance to Neontological Research. Guest speakers: Conrad Labandeira, Smithsonian; Geerat Vermeij, UC Davis; David Jacobs, UC Los Angeles; and Todd Oakley, UC Santa Barbara (April 2007)
  • Dr. Tony Ives, University of Wisconsin-Madison (January 2006)
  • Dr. Ruth Shaw, University of Minnesota (April 2005)
  • Dr. Ray Calloway, University of Montana, and Jerry Coyne, University of Chicago (January 2005)